Genome Analysis Toolkit
-
Updated
Dec 13, 2018 - R
#
bamtools
Here are 4 public repositories matching this topic...
This is an automated workflow pipeline for analyzing and processing Bulk-RNA seq data, implemented primarily in bash, python and R, and wrapped in a NextFlow workflow to characterize the gene landscape in the samples.
rna-seq multiqc bedtools samtools featurecounts bamtools fastqc rna-seq-pipeline htseq-count stringtie bulk-rna-seq nextflow-pipeline
-
Updated
Jul 25, 2025 - Nextflow
This is an automated workflow pipeline for analyzing and processing Bulk-RNA seq data, implemented primarily in bash, python and R, and wrapped in a NextFlow workflow to characterize the gene landscape in the samples.
rna-seq multiqc star bedtools rna-seq-analysis samtools featurecounts bamtools htseq-count stringtie bulk-rna-seq nextflow-pipelines bulk-sequencing
-
Updated
Nov 22, 2024 - Nextflow
Improve this page
Add a description, image, and links to the bamtools topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the bamtools topic, visit your repo's landing page and select "manage topics."