Pinned Loading

1. scDotPlot scDotPlot Public

   Repository for the scDotPlot Bioconductor package

   R 7 1

2. gg4way gg4way Public

   Repository for the gg4way Bioconductor package

   R

3. DMRichR DMRichR Public

   A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosin…

   R 46 24

4. CpG_Me CpG_Me Public

   A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)

   Shell 23 12

5. RNA-seq RNA-seq Public

   RNA-seq alignment and analysis pipeline

   R 6 4

6. FASTQ_Me FASTQ_Me Public

   An example script of how to download WGBS data from SLIMS, check md5sums, merge lanes, and submit a project to CpG_Me

   Shell 2